Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837843.1_cds_XP_016506802.1_19996
CDS Infomation

[gene=LOC107824528] [db_xref=GeneID:107824528] [protein=general transcription factor IIE subunit 1-like] [protein_id=XP_016506802.1] [location=join(200913..200935,201030..201152,201416..201536,202472..202600,202932..203041,203135..203318,205342..205536,206199..206426,206570..206768,208613..208719)] [gbkey=CDS]
Sequence

ATGAGCATTGAACCATTTAATCGATTGGTGAAACTTGCGGCTAGAGCTTTTTACGATGAC
ATTACGACTAAAGGCGACAATCAGCCCAAATCCGGCAGAAGTGACAATCGAGGAATTGCG
GTGGTTATTTTAGACGCACTCACAAGGCGGCAATGGGTGAGGGAAGAAGACTTGGCAAAG
GATTTGAAGTTGCACACAAAGCAACTCCGGCGCACCTTGCGTTTCTTTGAAGAAGAAAAG
CTCATCACGCGGGATCATAGGAAAGAGGGAGCAAAAGGTGCAAAAGTATACAATGCTGCA
GTTGCAGCTACTGTTGATGTCCTGCAGAATGGGAAAGAAGGAGATGACAAAATAAAGATG
CATACTCATTCTTATTGCTGCCTGGACTATTCTCAGATATTTGATGTCGTGAGGTACAGA
CTACACCGAATGAAGAAAAAGTTAAGAGATGAGCTGGATAACAAAAACACAGTGCAGGAG
TATATATGTCCCAATTGTGGGAAAAGATATACTGCGTTGGATGCATTGCGGTTGGTGTCC
CCTGAGGATGAGTACTTCCACTGCGAAAGTTGCAACGGGGAACTAGTGGCAGAGAGCGAC
AAGTTATCCTCTCAAGGGACTGTAGATGGGGATGATAAGGATAGGAGACGGCGTCGCGAA
AAATTGGAAGACATGCTTCATAGGATGGAGGCACAACTCAAACCGTTGATGGATCAACTT
AACAGAGTAAAAGATTTACCTGCTCCCGAGTTTGGAAGCCTTCAAGCGTGGGAAGTGCGA
GCCAATGCTGTGGCCCGAGGTGCAAATGGAGATAATGCAAATGACCCTTCAAAGTCAGGA
CAAGGATTTGGTGGAACACCTATGCCTTTTGTTGGAGAGACGAAGGTTGAAGTTGCTTTC
TCTGGTCTTGAAGAAAAAGGAGATATCAAATCTGAGATTTCAGCTACACCAATGAAAGTT
TTGCCTCCATGGATGATAAAGGAGGGAATGAATCTTACAAAGGAGCAGCGTGGAGAGGTC
AAGCAAGAGTCCAATATGGAGGGTAGTTCTGCTGCAGCGGGGTCATCTGATGACAAGAAG
TCCATAGAAACTGAGGACGTGAAAAATATAAAGGATGAATATGTTAAGGCATATTACGAG
GCTCTATTCAAGCGACAAAGAGAGCAAGAAGAAGCTGCCAAAAGTTTACAGGAAACATCA
ACTACAGATGGAGTGGATAACACCTCTACTGAGCGCCAAGTCGGCATGAAAGCCAAACGT
GAAGAGGAGGATGAAGGAGAGGATATTGAATGGGAGGAGGCCCCACCTGCAGGTAATAAT
ACAACTGGAAATTTCAAGGTTAGCGACTTGAATGTCCAAGCAGATGCTTCAGGAGATGAC
AATGATGAGGAAGATGACATAGACTGGGAGGAAGGTTGA

Peptide Sequence

PEP ID

XP_016506802.1
PEP Infomation

PREDICTED: general transcription factor IIE subunit 1-like [Nicotiana tabacum]
Sequence

MSIEPFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGIAVVILDALTRRQWVREEDLAK
DLKLHTKQLRRTLRFFEEEKLITRDHRKEGAKGAKVYNAAVAATVDVLQNGKEGDDKIKM
HTHSYCCLDYSQIFDVVRYRLHRMKKKLRDELDNKNTVQEYICPNCGKRYTALDALRLVS
PEDEYFHCESCNGELVAESDKLSSQGTVDGDDKDRRRRREKLEDMLHRMEAQLKPLMDQL
NRVKDLPAPEFGSLQAWEVRANAVARGANGDNANDPSKSGQGFGGTPMPFVGETKVEVAF
SGLEEKGDIKSEISATPMKVLPPWMIKEGMNLTKEQRGEVKQESNMEGSSAAAGSSDDKK
SIETEDVKNIKDEYVKAYYEALFKRQREQEEAAKSLQETSTTDGVDNTSTERQVGMKAKR
EEEDEGEDIEWEEAPPAGNNTTGNFKVSDLNVQADASGDDNDEEDDIDWEEG

Transcript Sequence

Gene sequence data has not been registered.